This syllabus applies only to Brian McCauley's Bio 6A for Fall 2016.

Course Description

Biology 6A is the first quarter of a three-quarter series intended as an introduction to biology for students majoring in the life sciences. Biology 6A is about organismal biology – the study of how organisms work. The course will cover the phylogenetic relationships and comparative functional biology of all organisms, including prokaryotes, protists, fungi, plants, and animals. A substantial part of the lecture will be devoted to animal and plant physiology. The course will also include an introduction to scientific method and a survey of the various disciplines of biology.

In the Bio 6A lab and lecture we will focus on three kinds of biological questions:

1) What kinds of organisms are there? In the lab, you’ll have an opportunity to observe representatives of the various kingdoms of living things. The course will emphasize common themes among kingdoms, rather than a detailed view of the diversity within each kingdom. The course will also cover basic principles of how organisms are classified.

2) What are the basic problems that organisms must solve? All kinds of organisms, from mushrooms to humans, must solve many of the same problems: taking in energy and nutrients, growth, reproduction, finding a place to live. Animals, fungi, plants, and other groups of organisms can be seen as different sets of solutions to these and other basic challenges that face all living things. We’ll begin our functional approach to biology by defining these problems.

3) How do various kinds of organisms solve these problems? This is the heart of the course. You’ll investigate how the form and function of organisms come together to solve the basic problems of life. In lecture, this will include fundamental principles governing how organisms work – in other words, physiology. In lab, your investigations will include looking at anatomy and analyzing how the varying forms of organisms allow them to solve biological problems.

In addition to these three biology-specific questions, we’ll also look at one broader topic:

4) How does science work, and what is scientific knowledge? If you’re getting a science degree, you should become more than a passive receptacle for information. You should be able think like a scientist. Some of the lab activities in this course will address the challenges of scientific method.

For a detailed list of topics covered, see the course calendar.

What isn’t covered in Bio 6A; the rest of the series

Since Biology 6A is part of a series, it does not cover all aspects of biology. Biology 6B covers cellular and molecular biology, and Biology 6C covers ecology and evolution. Both these courses will expand on some topics raised in 6A. None of the three courses is intended to stand alone. By completing Biology 6A, B, and C, you will have the opportunity to give yourself a strong foundation for all areas of life science. Bio 6A, B, and C are accepted for transfer at most universities, and will provide a solid preparation for upper-division biology courses.

Labs for Bio 6A

The lab is a fundamental part of the course. In order to succeed in biology, you’ll have to learn how to do well in labs. Unlike your chemistry labs, the Bio 6A lab is primarily about observation, not experimentation. Your instructor will give you a clear idea of what you should be observing and what it means, but you’ll have to do the work of learning the material in lab. Don’t plan on going home early. The Bio 6A website will serve as the lab manual; there's no print manual.

Grading:

You will receive one grade for lecture and lab combined. Grades will be calculated as follows (all scores will be converted to %):

Midterms 35% of overall grade
Lecture final 25%  
Quizzes & assignments 14%  
Lab exam I 7%  
Lab exam II 14%  
Lab participation 5%  
Total:  100%  

All your scores will be converted to percentages, and your percent scores will be averaged. All quizzes & assignments will have the same value. If you get 10 out of 20 (50%) on one quiz and 41 out of 41 (100%) on another, your quiz average would be 75%. It doesn’t matter that the quizzes have different numbers of questions. The same is true of midterms and lab exams.

To figure out your own grade, multiply your average midterm percent score by 0.3, your lecture final percent score by 0.25, your quiz average by 0.2, etc.

Midterms: There will be 3 midterm exams. The midterms will include multiple-choice and essay questions. A study guide for each midterm will be posted on the class web site before the exam.

Lecture Final: The final, like the midterms, will include a variety of question formats. It will be given during the scheduled final exam period. The final will include some review material from earlier in the quarter and some new material given since the last midterm. A study guide will be posted.

Quizzes & assignments will cover both lecture and lab material, and may be given in lecture or lab. There will be a variety of formats, from worksheets done with a partner in lab to multiple-choice done individually in lecture. Your lowest quiz score will be dropped. All the remaining scores will be converted to percentages, and your average percent score will be used in calculating your grade. You should bring a Scantron sheet (50 questions per side) to every lecture and lab meeting.

Lab Exams: The lab exams will be practicals -- in other words, you'll look at specimens and answer questions about them. Lab exam I will cover only the material on plants and fungi; lab exam II will cover all the animal labs. Since lab exam II covers more lab days, it's worth more points.

Lab participation is just that – showing up and participating in lab. These are easy points to get, but if you miss labs, are frequently late, or don’t work with your partners, you will lose points. Also, if you don’t participate fully in doing the work for a particular lab, you may not get credit for group quizzes or assignments, even if your name is on the finished product.

Lab work is required in order to pass the class. If you miss four or more labs, you will receive an F, even if you otherwise have enough points to pass. Showing up briefly doesn't count as attending the lab.

Other rules for exams and quizzes: Be on time. Arriving late to an exam is disruptive to other students and unfair to your group members if it’s a group quiz. Some lab quizzes wll be based on PowerPoint slides; if you are late and miss some of the slides, you must leave the relevant questions blank. If you have missed a substantial part of a quiz, I might not let you take the quiz. If you are so late for a midterm that another student has already completed the exam and left, I will not let you take the midterm.

Bring all the necessary materials to class. Once an exam starts, you may not ask other students for Scantrons, pencils, or other items. You may not leave the room and return to finish your exam.

Grading scale: all scores during the quarter will be numbers, not letter grades. At the end of the term, your total score will be calculated and rounded off to the nearest whole number and your overall letter grade will be assigned according to this scale:

A+: 94% or more of total possible points for lecture & lab

A: 90% or more of total possible points for lecture & lab

A-: 87%

B+: 84%

B: 80%

B-: 77%

C+: 74%

C: 70%

D: 60 %

F: below 60%

Make-up exams and quizzes: in general, make-up exams or quizzes will not be available. I will drop one of your quiz scores, but other than that, missing exams will hurt your grade. You should take the midterm, even if you are not prepared or aren't feeling your best.

Course logistics

Enrollment:

I will not add you to the class after the add deadline has passed or drop you after the drop deadline has passed. If you decide to drop the course, that's your decision and your responsibility; if you stop attending but do not drop, you might end up with an F for the class.

Student Conduct

Students in this course must abide by the rules set out in the De Anza College Student Handbook Academic Integrity statement.

Cheating or violating exam rules can cause you to receive a zero for an exam or assignment, possibly resulting in an F for the course. Cheating includes using a phone or translating dictionary during an exam, having any extra papers visible or available during an exam, communicating with anyone, or anything else that could potentially give you an unfair advantage – even if you didn’t intend to cheat. For example, just looking at your cell phone during the exam is enough to earn you an F for the course -- even if you weren't using it to get test answers. Put your phone away during the exams.

Academic integrity also includes respect for other students' learning and well-being.  Any student who endangers others or repeatedly disrupts the class may be removed and excluded from the course, possibly receiving a grade of F. Disruption of the class may include lab safety violations or anything else that interferes with the appropriate learning environment.

Required materials:

Textbook: Campbell Biology, 10th edition, by Reece, Urry, Cain, Wasserman, Minorsky, and Jackson. I recommend the version with MasteringBiology (online access), but you don’t necessarily need it. Also, slightly older editions of the book will work, but the older your edition is, the more likely it is to be missing something found in the current edition. It doesn't matter whether you have the U.S. edition or the international edition, hardcover or paperback.

Lab Manual: There’s no lab manual! Instead, this website will function as your lab manual. That means that you’ll need to do some reading online both before and during lab. We have a few computers available in the lab room for use during lab, but you will find it helpful if you can bring your own device for accessing the site -- laptop, iPad, or even phone. Alternatively, as a last resort, you could print the necessary pages before lab. Since you'll be working in groups, you'll be able to share computers; don't worry if you don't have your own. Sharing will be a lot easier if you've read the lab pages before you arrive.

Scantrons: You'll have some quizzes and problem sets in lab, and you will need Scantron forms to answer some of these. Bring Scantrons (the long ones with fifty questions per side, any color) to each lab, since these quizzes won't necessarily be announced beforehand. Bring a pencil, too.

Course Outline & Student Learning Objectives (SLO)

To see the complete list of topics covered in this course, you can look at my calendar page or the official course outline for Bio 6A at De Anza.

These student learning objectives have been listed for Bio 6A:

Outcome 1: Analyze and compare the process of homeostasis as applied to common physiological processes across higher taxonomy.

Outcome 2: Apply the principles of the scientific method to critique case studies in comparative biology research.

Outcome 3: Contrast the Linnaean traditional phylogenetic and cladistic processes of taxonomy.

Special accommodations

Special accommodations can be made for disabled students or others with special needs. If you need any special accommodations, you must contact both the Disabled Student Services office (864-8753) and the instructor.

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